A Belarusian sprinter early on Wednesday left the Polish embassy in Tokyo, where she had sought protection after refusing her team's orders to return home.
Krystsina Tsimanouskaya's refusal to board a flight home, after she said she was taken by her team to the airport against her wishes, caused drama at the Olympics.
A darkened van left the compound with police escort around 7.05am after luggage had been loaded into another van.
A police official confirmed Tsimanouskaya was in the vehicle.
She was expected to go to Poland, her supporters have said. Warsaw has offered her a humanitarian visa.
The International Olympic Committee said on Tuesday it was expecting a report from the Belarusian team on Tsimanouskaya's case.
US Secretary of State Antony Blinken accused Belarus President Alexander Lukashenko's regime of intolerable 'transnational repression' in the matter.
A Belarusian sprinter early on Wednesday left the Polish embassy in Tokyo, where she had sought protection after refusing her team's orders to return home
Krystsina Tsimanouskaya's refusal to board a flight home, after she said she was taken by her team to the airport against her wishes, caused drama at the Olympics
A darkened van left the compound with police escort around 7.05am after luggage had been loaded into another van
A police official confirmed Tsimanouskaya was in the vehicle. She was expected to go to Poland, her supporters have said. Warsaw has offered her a humanitarian visa
Staff members holding luggage are seen outside the embassy of Poland where Belarusian sprinter Kristina Timanovskaya was
A car beleived to be carrying Belarus athlete Krystsina Tsimanouskaya, who claimed her team tried to force her to leave Japan following a row during the Tokyo 2020 Olympic Games, leaves the Polish embassy in Tokyo
Police officers watch as the car carrying Belarusian sprinter Krystsina Tsimanouskaya leaves the embassy
The police and journalists are seen outside the embassy of Poland early on Wednesday morning
Tsimanouskaya said it was 'made clear' she would be 'punished' on her return to Belarus - before she escaped by handing herself over to Japanese police.
She said she expected to be kicked off the national team and coaches made 'thinly disguised hints that more would await me'.
She also called for sanctions against athletics head coach Yuri Moisevich and for a probe into 'who actually took the decision that I can't compete'.
Tsimanouskaya spoke out even as the body of activist Vitaly Shishov, an opponent of dictator Alexander Lukashenko who helped his countrymen flee Belarus, was found hanged in a park in Kiev with friends claiming he was killed by regime thugs.
Shishov's body was found in a park close to his house on Tuesday, a day after he had gone missing while out for a jog.
Police opened a murder probe and will be investigating the possibility he was killed and his death made to look like a suicide, as friends said there were signs he had been beaten before his death - including a broken nose.
Shishov had reported being followed by 'strangers' on his runs shortly before he vanished, friends added, while Ukrainian security forces had warned them Belarus KGB agents were sneaking into the country disguised as refugees.
The timing of Shishov's death underlines the risks to Tsimanouskaya and her family, with husband Arseni Zhdanevich fleeing Belarus to the Ukrainian capital.
It is not clear whether he made contact with Shishov during his escape.
Krystsina Tsimanouskaya, 24, the Belarus sprinter who was almost kidnapped from the Tokyo Olympics by her own trainers, spoke from the Polish embassy where she was holed up
She hit out even as the body of Vitaly Shishov, an activist opposed to Alexander Lukashenko's regime, was found in Ukraine a day after he went missing
Police in Kiev said Shishov's body was found hanged in woods near his home, but that they have opened a murder probe on suspicion that the 'suicide' was staged by his killers
Police stand guard near where Shishov's body was found as friends say they believe he was killed by Belarusian KGB agents
Olympic officials have also contacted Tsimanouskaya's mother, who is still in Belarus, to tell her that her daughter has been recruited by foreign spies and must be brought home.
It is thought her father and grandmother also live in the country, though it is unclear if they have also been approached.
Tsimanouskaya added she hopes to continue her sporting career once she arrives in Poland, having hoped to compete at two more Olympics, but for the time being her safety is her priority.
Asked what made her fear she would be in danger at home, Tsimanouskaya said the key phrase was that 'we didn't make the decision for you to go home, it was decided by other people, and we were merely ordered to make it happen'.
She added she was worried about her parents, who remain in Belarus. Her husband, Arseni Zdanevich, left the country and is in Ukraine.
Speaking to German media, Tsimanouskaya said she never expected the scandal to become as big as it has - insisting that she is not involved in politics and did not intend her criticism of team coaches to be political.
Before his death, Shishov ran Belarusian House - an organisation that helped his fellow countrymen escape Lukashenko's increasingly brutal regime.
The group provided advice on accommodation, jobs and legal issues, according to its website.
Vyasna human rights organisation said that 'unknown people had been watching him during his jogging.
'Suspicious people also approached him and his girlfriend, trying to talk'.
Friend and colleague Yury Shuchko added that Shishov 'knew he was being hunted' after Ukrainian security forces warned them that Belarusian special agents were sneaking into the country posing as refugees.
I suspect it was done by the KGB or a special service that works for Lukashenko's regime', he said.
'We talked last week - he had a premonition…
'I hope this coward and truly meaningless murder will be thoroughly investigated.
'We will continue our work, we will continue protecting the Belarusians in Ukraine as we did before.'
Separately, a spokesman for Belarusian House said there is 'no doubt' Shishov died in an 'operation' carried out by the Belarus secret police.
Agents acted to 'eliminate a Belarus man who was truly dangerous for the regime,' the spokesman said, adding: 'Vitali was under surveillance.
'The facts were notified to the police.
'We were also repeatedly warned by both local sources and our people in the Republic of Belarus about all kinds of provocations, including kidnapping and liquidation.
'Vitaly treated these warnings stoically and with humour.'
Police have launched an appeal for information from friends on 'possible threats' against him, and well as details on his psychological state.
Lukashenko's enemies have been found dead by hanging in suspicious circumstances previously.
In 2010, Oleg Byabenin, a Belarusian journalist and founder of Charter'97 human rights group, was found hanged at a country house.
His colleagues disputed the official finding of suicide. Last year activist Nikita Krivtsov, 28, was found hanged in a Minsk park.
Tsimanouskaya became a target of the regime when she uploaded a post to Instagram last week criticising her trainers for entering her into the 4x400m relay without her knowledge and without her training for the event.
She was due to compete in the 200m sprint on Monday, but was barred from taking part in the event.
Tsimanouskaya appealed that decision to the Court of Arbitration for Sport but was turned down.
She was next seen at Tokyo's Haneda airport on Sunday where she handed herself over to police, claiming she was being taken out of the country against her will and that she feared for her safety if she returned home.
The International Olympic Committee has since launched an investigation into the claims.
Belarusian opposition leader Svetlana Tsikhanouskaya arrives at Downing Street on Tuesday to meet with Prime Minister Boris Johnson
Mr Johnson pledged the UK's support for democratic movements in Belarus as he met with Ms Tsikhanouskaya inside Downing Street
Lukashenko, known as Europe's last dictator, has cracked down on dissent since claiming victory in elections last year that are widely considered to have been rigged - jailing critics who have reported being beaten and electrocuted by police behind bars. At least 10 people have died as a result, opposition activist say.
Svetlana Tsikhanouskaya, the exiled opposition leader who is believed to have beaten Lukashenko in that election, is due to meet UK Prime Minister Boris Johnson yesterday to discuss the deteriorating situation in Belarus.
Speaking to BBC Radio 4, she said: 'I want the British Government to keep Belarus on the agenda, taking into consideration all the violence that's going on inside the country and... the threat that the regime now is for the international community.'
Mr Johnson later told her that he was 'on her side' and supports efforts to establish democracy in Belarus.
Meanwhile state-owned media in Belarus unleashed a full-scale character assassination of their athlete on Tuesday - branding her a 'monster', and 'scum' with an 'ego inflated to incredible sizes'.
She was snared by a 'sudden James Bond-like' sting operation from the West, claimed an outlet close to dictator Alexander Lukashenko.
The 24-year-old sprinter was branded a 'crazy woman' and a 'nobody' in an official media hatchet job that stated: 'The swamp chomped, spoiling the pure Olympic atmosphere with the stench of Krystsina